GESR Fees
mRNA Expression Profiling
Affymetrix
| Service | Fee |
|---|
| 3′ Gene Expression Analysis full service: sample preparation, labeling, hybridization, and scanning | $325/sample* |
| Whole Transcript Expression Analysis full service: sample preparation, labeling, hybridization, and scanning | $365/sample* |
| Partial service: sample hybridization, staining, washing, and scanning | $140/sample* |
| Partial service: sample fragmentation, labeling, hybridization, staining, washing, and scanning | $200/sample* |
Agilent
| Service | Fee |
|---|
| Gene expression full service: sample preparation, labeling, hybridization, & scanning | One-color: $200/sample* / Two-color: $300/sample* |
| Partial service: sample hybridization and scanning | $100/slide* |
ABI
| Service | Fee |
|---|
| TaqMan OpenArray Human Cancer Panel | $600/sample |
NanoString
| Service | Fee |
|---|
| nCounter PanCancer Panels | $100/sample* |
*Array/panel purchased separately
Next Generation Sequencing
| Service | Fee |
|---|
| RNAseq analysis | $600/sample (25 M reads) |
| Service | Fee |
|---|
| Whole Exome Sequencing (WES) | $1,000/sample (100X) |
| 16S ribosomal RNA gene amplicon sequencing | $100/sample |
| Whole-genome shotgun metagenomics sequencing | $450/sample |
SNP Genotyping and CNV Analysis
ABI
| Service | Fee |
|---|
| TaqMan SNP genotyping data generation | $300 per 384-well plate |
| TaqMan SNP genotyping assay | $350 per assay |
Illumina
| Service | Fee |
|---|
| HumanOmni2.5-8 v1.2 DNA Analysis | $200/sample* |
*Array/panel purchased separately
aCGH and CNV Analysis
Agilent
| Service | Fee |
|---|
| Sample preparation, labeling, hybridization and scanning | $300/sample* |
| Hybridization and scanning | $100/slide* |
*Array/panel purchased separately
DNA Methylation Analysis
Illumina
| Service | Fee |
|---|
| Illumina Infinium MethylationEPIC Kit | $500/sample** |
Qiagen Pyrosequencing
| Service | Fee |
|---|
| Methylation assay design and setup (up to 92 samples; includes QC samples – Positive control, NEG control, etc) | $825/assay |
| Bisulfite modification and cleanup | $545/96-well plate |
| Data generation (PCR and pyrosequencing) | $750/assay |
| Data analysis (Methylation results reporting) | $75/assay |
**Includes cost of array
microRNA Expression Profiling
ABI
| Service | Fee |
|---|
| TaqMan Array Human MicroRNA | $550/sample** |
| TaqMan Array Rodent MicroRNA | $600/sample** |
Affymetrix
| Service | Fee |
|---|
| GeneChip miRNA 4.0 array | $325/sample* |
Nanostring
| Service | Fee |
|---|
| nCounter Human v3 miRNA Expression Assay | $150/sample* |
*Array/panel purchased separately
**Includes cost of array
Quality Assessment with BioAnalyzer
| Service | Fee |
|---|
| RNA Nano/DNA 1000 | $100/chip |
| RNA Pico/ DNA high sensitivity | $150/chip |
| Small RNA | $180/chip |
DNA/RNA Isolation, QA, and Robotic Liquid Handling
| Service | Fee |
|---|
| RNA isolation/QA for cell/tissue | $100/sample |
| RNA isolation/QA for FFPE slide | $150/slide |
| RNA isolation/QA for FFPE scroll | $150/scroll |
| DNA Isolation/QA for cell/tissue | $100/sample |
| Plating and Assay preparation (tubes to 96-well plate) | $350/96-well plate |
| Axon GenePix 4000A Scanner | $25/use (not to exceed $25/day, $375/year) |
| Robotic liquid handling | $250/ for first 384-well plate, $25/plate thereafter |
Protein Analysis
NanoString
| Service | Fee |
|---|
| nCounter Vantage 3D Protein Solid Tumor Panel | $150/sample* |
*Array/panel purchased separately
