Genomics and Epigenomics Shared Resource
GESR Home | Services | Fees | Publications | Schedule
Fees| Service | Fee for LCCC Members |
| Gene Expression Profiling | |
| Affymetrix | |
| Microarray chip hybridization, staining, washing, and scanning (Partial service) | $140/sample (chip purchased separately) |
| 3' Gene Expression Analysis-full service: | $325/sample (chip purchased separately) |
| Arrays including: GeneChip Human Genome U133 Plus 2.0, GeneChipMouse Genome 430A2.0, and GeneChip Rat Genome 230 2.0 | |
| Whole-Transcript Expression Analysis-full service: | $365/sample (chip purchased separately) |
| Arrays including Human Exon 1.0 ST Array & Gene1.0 Array for Human, Mouse and Rat. | |
| Agilent | |
| Agilent array scan (hybridization, scanning, and data analysis) | $100/array (arrays purchased separately) |
| Agilent Gene Expression Full Service (sample preparation, labeling, hybridization, scanning, and data analysis). Arrays include 8x60K or 4x44K Human Gene Expression Microarrays | One-color: $200/array (arrays purchased separately) Two-color: $300/array (arrays purchased separately) |
| ABI | |
| ABI TaqMan Gene Expression assays | $1.5/gene/sample + $60/plate |
| Illumina | |
| Illumina Human HT-12 v4 Expression Bead Chip Full Service (sample preparation, labeling, hybridization, scanning, and data analysis). | $125/sample (includes cost of the array) |
| DNA Sequencing and Fragment Analysis through GENEWIZ (click to see detailed fee structure and submission instructions) | |
| DNA sequencing (reaction and sequencing) | $5.00/reaction |
| DNA sequencing (sequencing only) | $2.50/reaction |
| Fragment analysis (run only) | $5.00/reaction |
| Fragment analysis (run and data analysis) | $20.00/reaction |
| Illumina HiScanSQ Next Generation Sequencing | |
| TruSeq Human Exome sequencing | $800/sample |
| SNP Genotyping and CNV Analysis | |
| ABI | |
| SNP genotyping by TaqMan real-time PCR | $1.5/gene/sample + $60/plate |
| Illumina | |
| SNP genotyping by Illumina BeadXpress | (Click to see detailed fee structure) |
| Qiagen pyrosequencing | |
| Tri-allelic SNP genotyping by pyrosequencing | $5.00/sample |
| Affymetrix | |
| Copy Number Anaysis-full service: | |
| Genome-Wide Human SNP Array 6.0 | $365/sample (chip purchased separately) |
| Agilent | |
| Agilent array scan (hybridization, scanning, and data analysis) | $100/array (arrays purchased separately) |
| Agilent CGH array Full Service (sample preparation, labeling, hybridization, scanning, and data analysis). | $200/array (arrays purchased separately) |
| DNA Methylation Analysis | |
| Qiagen pyrosequencing | |
| Validation and optimization of new assays (does not include inventoried assays) | $500/assay |
| Methylation analysis by pyrosequencing includes bisulfite modification of DNA | $16.50/sample |
| ABI | |
| Real Time Methylation Specific PCR (RT-MSP) | $1.5/gene/sample + $60/plate |
| Agilent | |
| Agilent array scan (hybridization, scanning, and data analysis) | $100/array (arrays purchased separately) |
| Agilent DNA Methylation array Full Service (sample preparation, labeling, hybridization, scanning, and data analysis). | $200/array (arrays purchased separately) |
| Illumina | |
| Illumina Infinium Human Methylation450 BeadChip | $450/array (includes cost of the array) |
| Methylation by Illumina BeadXpress | 96-plex CpG: $12,902.40 +$250/plate (480 samples) |
| 384-plex CpG: $44,102.40 +$250/plate (480 samples) | |
| (Click to see detailed fee structure) | |
| microRNA Expression Profiling | |
| ABI | |
| miRNA analysis by TaqMan Low Density Array (TLDA), includes microRNA array, RT-PCR, and PCR reaction | $550/sample (includes cost of the array) |
| Affymetrix | |
| miRNA Analysis-full service: | |
| GeneChip miRNA 2.0 array | please inquire for pricing |
| Agilent | |
| Agilent Human miRNA array Full Service (sample preparation, labeling, hybridization, scanning, and data analysis). | $350/sample (includes cost of the array) |
| RNA Quality Assessment | |
| RNA quality measurement by Agilent Bioanalyzer | $50/chip |
| DNA/RNA Isolation and Plating and Assay Preparation | |
| DNA/RNA Isolation | $15/sample |
| Plating and Assay preparation | $350/96-well plate (reformat 96 DNA |
| samples in tubes to 96-well deep plate, OD and normalize) | |
| $200/Reformat 4 96-well plates into 384-well plate, plus $6/384-well plate created | |
| User Operated Instruments | |
| ABI Sequence Analyzer HT7900 | $20/hr |
| Berthold LB 96 Luminometer | $100/year |
| Tecan Ultra Fluorescence Microplate Reader | $100/year |
| Amaxa Nucleoporator | $100/year |
| Axon GenePix 4000A Scanner | $100/year |
| Alpha Innotech FluoroChem-8900 | $100/year |
| NanoDrop ND-1000 Spectrophotometer | $100/year |
| Beckman DU-640 Spectrophotometer | $100/year |
| BioTek EL-808IU-PC Microplate Reader | $100/year |
| LI-COR Odyssey Infrared Imager | $100/year |
| Advanced Data Analysis | |
| Software includes: R/Bioconductor | $75/hour |
| Partek Genomics Suite | |
| Agilent GeneSpring | |
| Agilent DNA Analytics (Genomics Workbench) | |
| Integromics RealTime StatMiner | |
| Ingenuity Pathway Analysis (IPA) Tool | |
